A lot of corporations, persons and establishments is wanted to provide controlling, management, organization of the files that they use. That’s why, instead of the files that they use keeping them on physical storage devices, they use computer-aided electronic filing system. Portable Document Format (PDF) includes more superior features other than electronic filing systems. In this practise, it is shown that searching a word or a phrase and generating and showing the results as a new PDF document in such as electronic books, arguments, technical reports etc. PDF documents or over the bookmarks of documents. This structure is formed the parts such as generating PDF documents, determining document’s output unit, opening document, adding content to document, document content or finding a phrase that it is searched over the bookmarks, generating as a PDF file that the result of a inquiry over a table in the database and shown a particular length of a PDF document. The structure that it is developed in Java Programming Language is placed easily in web applications that it is running on JSP servers.