Genome sequence of Anoxybacillus ayderensis AB04(T) isolated from the Ayder hot spring in Turkey

BELDÜZ A. O., ÇANAKÇI S., CHAN K., KAHAR U. M., CHAN C. S., YAAKOP A. S., ...Daha Fazla

STANDARDS IN GENOMIC SCIENCES, cilt.10, 2015 (SCI-Expanded) identifier identifier identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 10
  • Basım Tarihi: 2015
  • Doi Numarası: 10.1186/s40793-015-0065-2
  • Dergi Adı: STANDARDS IN GENOMIC SCIENCES
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus
  • Anahtar Kelimeler: Anoxybacillus, Bacillaceae, Bacillus, Geobacillus, Glycoside hydrolase, Thermophile, MODERATELY THERMOPHILIC BACTERIUM, SP NOV., PROTEIN, CLONING, PURIFICATION, DATABASE, PROPOSAL, TOOL, INFORMATION, ANNOTATION
  • Karadeniz Teknik Üniversitesi Adresli: Evet

Özet

Species of Anoxybacillus are thermophiles and, therefore, their enzymes are suitable for many biotechnological applications. Anoxybacillus ayderensis AB04(T) (= NCIMB 13972(T) = NCCB 100050(T)) was isolated from the Ayder hot spring in Rize, Turkey, and is one of the earliest described Anoxybacillus type strains. The present work reports the cellular features of A. ayderensis AB04(T), together with a high-quality draft genome sequence and its annotation. The genome is 2,832,347 bp long (74 contigs) and contains 2,895 protein-coding sequences and 103 RNA genes including 14 rRNAs, 88 tRNAs, and 1 tmRNA. Based on the genome annotation of strain AB04(T), we identified genes encoding various glycoside hydrolases that are important for carbohydrate-related industries, which we compared with those of other, sequenced Anoxybacillus spp. Insights into under-explored industrially applicable enzymes and the possible applications of strain AB04(T) were also described.