Whole genomes from bacteria collected at diagnostic units around the world 2020

Nag, Sidsel; Larsen, Gunhild; Szarvas, Judit; Birkedahl, Laura; Gulyas, Gabor; Ciok, Wojchiech; Lagermann, Timmie; Tafaj, Silva; Bradbury, Susan; Collignon, Peter; Daley, Denise; Dougnon, Victorien; Fabiyi, Kafayath; Coulibaly, Boubacar; Dembele, Rene; Nikiema, Georgette; Magloire, Natama; Ouindgueta, Isidore; Hossain, Zenat; Begum, Anowara; Donchev, Deyan; Diggle, Mathew; Turnbull, Leeann; Levesque, Simon; Berlinger, Livia; Sogaard, Kirstine; Guevara, Paula; Valderrama, Carolina; Maikanti, Panagiota; Amlerova, Jana; Drevinek, Pavel; Tkadlec, Jan; Dilas, Milica; Kaasch, Achim; Westh, Henrik; Bachtarzi, Mohamed; Amhis, Wahiba; Salazar, Carolina; Villacis, JoseEduardo; Luzon, Maria; Palau, Damaris; Duployez, Claire; Paluche, Maxime; Asante-Sefa, Solomon; Moller, Mie; Ip, Margaret; Marekovic, Ivana; Pal-Sonnevend, Agnes; Cocuzza, Clementiza; Dambrauskiene, Asta; Macanze, Alexandre; Cossa, Anelsio; Mandomando, Inacio; Nwajiobi-Princewill, Philip; Okeke, Iruka; Kehinde, Aderemi; Adebiyi, Ini; Akintayo, Ifeoluwa; Popoola, Oluwafemi; Onipede, Anthony; Blomfeldt, Anita; Nyquist, Nora; Bocker, Kiri; Ussher, James; Ali, Amjad; Ullah, Nimat; Khan, Habibullah; Gustafson, Natalie; Jarrar, Ikhlas; Al-Hamad, Arif; Luvira, Viravarn; Paveenkittiporn, Wantana; BARAN, IRMAK; Mwansa, James; Sikakwa, Linda; Yamba, Kaunda; Hendriksen, Rene; Aarestrup, Frank

doi:10.1038/s41597-023-02502-7

Whole genomes from bacteria collected at diagnostic units around the world 2020

Nag S., Larsen G., Szarvas J., Birkedahl L. E. K., Gulyas G. M., Ciok W. J., ...Daha Fazla

SCIENTIFIC DATA, sa.1, 2023 (SCI-Expanded, Scopus)

Yayın Türü: Makale / Tam Makale
Basım Tarihi: 2023
Doi Numarası: 10.1038/s41597-023-02502-7
Dergi Adı: SCIENTIFIC DATA
Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus, BIOSIS, INSPEC, MEDLINE, Directory of Open Access Journals
Açık Arşiv Koleksiyonu: AVESİS Açık Erişim Koleksiyonu
Karadeniz Teknik Üniversitesi Adresli: Evet

Özet

The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.