Whole genomes from bacteria collected at diagnostic units around the world 2020

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Nag S., Larsen G., Szarvas J., Birkedahl L. E. K., Gulyas G. M., Ciok W. J., ...More

SCIENTIFIC DATA, no.1, 2023 (SCI-Expanded) identifier identifier

  • Publication Type: Article / Article
  • Publication Date: 2023
  • Doi Number: 10.1038/s41597-023-02502-7
  • Journal Name: SCIENTIFIC DATA
  • Journal Indexes: Science Citation Index Expanded (SCI-EXPANDED), Scopus, BIOSIS, INSPEC, MEDLINE, Directory of Open Access Journals
  • Karadeniz Technical University Affiliated: Yes

Abstract

The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.