Publications & Works

Publication Network

Published journal articles indexed by SCI, SSCI, and AHCI

Synthesis and evaluation of the antioxidant and anti-tyrosinase activities of thiazolyl hydrazone derivatives and their application in the anti-browning of fresh-cut potato

Djafarou S., Mermer A., Barut B., Tatar Yılmaz G., Khodja I. A., Boulebd H.
FOOD CHEMISTRY, no.414, pp.135745, 2023 (SCI-Expanded)

Design, synthesis, and enzyme inhibition evaluation of some novel Mono- and Di-O-ß-D-Glycopyranosyl Chalcone analogues with molecular docking studies

Çelik G., Tatar Yılmaz G., Şahin H., Barut B., Yaylı N.
TURKISH JOURNAL OF CHEMISTRY, vol.47, no.1, pp.171-184, 2023 (SCI-Expanded)

Synthesis of novel thiosemicarbazone derivatives as antidiabetic agent with enzyme kinetic studies and antioxidant activity

TOK F., KÜÇÜKAL B., BALTAŞ N., TATAR YILMAZ G., KAYMAKÇIOĞLU B.
PHOSPHORUS SULFUR AND SILICON AND THE RELATED ELEMENTS, vol.197, no.12, pp.1284-1294, 2022 (SCI-Expanded) identifier identifier

Evaluation of the effects of chlorhexidine and several flavonoids as antiviral purposes on SARS-CoV-2 main protease: molecular docking, molecular dynamics simulation studies.

Tatar G., Salmanli M., Dogru Y., Tuzuner T.
Journal of biomolecular structure & dynamics, vol.40, no.17, pp.7656-7665, 2022 (SCI-Expanded) Sustainable Development identifier identifier identifier

Synthesis, Antioxidant and Some Enzyme Inhibition Activities of New Sulfonyl Hydrazones and their Molecular Docking Simulations

Aktar B. S. K., Sicak Y., TATAR YILMAZ G., Oruc-Emre E. E.
PHARMACEUTICAL CHEMISTRY JOURNAL, vol.56, no.4, pp.559-569, 2022 (SCI-Expanded) identifier identifier

Synthesis, Biological Evaluation and in Silico Studies of New Pyrazoline Derivatives Bearing Benzo[d]thiazol-2(3H)-one Moiety as Potential Urease Inhibitors

TOK F., BALTAŞ N., TATAR YILMAZ G., KAYMAKÇIOĞLU B.
CHEMISTRY & BIODIVERSITY, vol.19, no.3, 2022 (SCI-Expanded) identifier identifier identifier

Structure prediction of eukaryotic elongation factor-2 kinase and identification of the binding mechanisms of its inhibitors: homology modeling, molecular docking, and molecular dynamics simulation

Tatar G., Taskin T.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, vol.40, no.24, pp.13355-13365, 2022 (SCI-Expanded) Sustainable Development identifier identifier identifier

Synthesis of novel pancreatic lipase inhibitors: Biological investigation and in silico studies

Mermer A., Demirci S., TATAR G.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, vol.40, no.2, pp.931-940, 2022 (SCI-Expanded) identifier identifier identifier

Synthesis of benzoyl hydrazones having 4-hydroxy-3,5-dimethoxy phenyl ring, their biological activities, and molecular modeling studies on enzyme inhibition activities

Kursun Aktar B. S., Sicak Y., TATAR YILMAZ G., Oruc-Emre E. E.
TURKISH JOURNAL OF CHEMISTRY, vol.46, pp.236-252, 2022 (SCI-Expanded) identifier identifier identifier

Investigation of the antimicrobial activities of various antimicrobial agents on Streptococcus Mutans Sortase A through computer-aided drug design (CADD) approaches

SALMANLI M., Yilmaz G. T., TÜZÜNER T.
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, vol.212, 2021 (SCI-Expanded) Sustainable Development identifier identifier identifier

Synthesis, biological evaluation (antioxidant, antimicrobial, enzyme inhibition, and cytotoxic) and molecular docking study of hydroxy methoxy benzoin/benzil analogous

Yaylı N., Kılıç G., Kahriman N., Kanbolat Ş., Bozdeveci A., Alpay Karaoğlu Ş., et al.
BIOORGANIC CHEMISTRY, vol.115, 2021 (SCI-Expanded) Sustainable Development identifier identifier identifier

Investigation of potential inhibitor properties of ethanolic propolis extracts against ACE-II receptors for COVID-19 treatment by molecular docking study

Guler H. İ., Tatar G., Yildiz O., Belduz A. O., Kolayli S.
ARCHIVES OF MICROBIOLOGY, vol.203, no.6, pp.3557-3564, 2021 (SCI-Expanded) Sustainable Development identifier identifier identifier

Computational drug repurposing study of the RNA binding domain of SARS-CoV-2 nucleocapsid protein with antiviral agents

Tatar G., Ozyurt E., Turhan K.
BIOTECHNOLOGY PROGRESS, vol.37, no.2, 2021 (SCI-Expanded) identifier identifier identifier

Determination of potential selective inhibitors for ROCKI and ROCKII isoforms with molecular modeling techniques: structure based docking, ADMET and molecular dynamics simulation

Secinti B. B., Tatar G., Tok T. T.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, vol.37, no.9, pp.2457-2463, 2019 (SCI-Expanded) identifier identifier identifier

Synthesis, anticancer activity and ADMET studies of N-(5-methyl-1,3,4-thiadiazol-2-yl)-4-[(3-substituted)ureido/thioureido] benzenesulfonamide derivatives

KARAKUŞ S., TOK F., Tuerk S., ŞALVA E., Tatar G., Taskin-Tok T., et al.
PHOSPHORUS SULFUR AND SILICON AND THE RELATED ELEMENTS, vol.193, no.8, pp.528-534, 2018 (SCI-Expanded) identifier identifier

Clarification of Interaction Mechanism of Mouse Hepatitis Virus (MHV) N and nsp3 Protein with Homology Modeling and Protein-Protein Docking Analysis.

Tatar G., Tok T.
Current computer-aided drug design, 2016 (SCI-Expanded) Sustainable Development identifier identifier identifier

Articles Published in Other Journals

Molecular docking, synthesis and biological evaluation (enzyme inhibition, antimicrobial and antioxidant) of methoxy benzoin/benzil/stilbenoid derivatives

YAYLI N., KAHRİMAN N., BOZDAL G., SERDAROĞLU V., ALİYAZICIOĞLU R., SELLİTEPE H. E., et al.
ORGANIC COMMUNICATIONS, vol.15, no.2, pp.129-147, 2022 (ESCI) Creative Commons License identifier identifier

Bazı Kalkonların COVID-19 Tedavisine Yönelik SARS-CoV-2 Ana Proteaza Bağlanma Mekanizmasının Moleküler Kenetleme Yaklaşımı ile Aydınlatılması

Tatar Yılmaz G., Aktar B. S. K.
International journal of advances in engineering and pure sciences (Online), vol.33, no.4, pp.660-669, 2021 (Peer-Reviewed Journal) Sustainable Development

SARS-CoV-2 Ana Proteaz Enzimine Yönelik Antiviral Bileşiklerin Bilgisayar Destekli İlaç Tasarımı Yöntemleri ile Değerlendirilmesi

TATAR YILMAZ G., YILMAZ E.
European Journal of Science and Technology, no.32, pp.1043-1047, 2021 (Peer-Reviewed Journal) Sustainable Development

Target-Driven Design of a Coumarinyl Chalcone Scaffold Based Novel EF2 Kinase Inhibitor Suppresses Breast Cancer Growth In Vivo

Onder F. C., Kahraman N., Atici E. B., Cagir A., Kandemir H., Tatar G., et al.
ACS PHARMACOLOGY & TRANSLATIONAL SCIENCE, vol.4, no.2, pp.926-940, 2021 (ESCI) Sustainable Development identifier identifier identifier

Refereed Congress / Symposium Publications in Proceedings

Evaluation of The Effects of Different Formulations of Subunit Covid-19 Vaccine on Cytokine Levels in HepG2 Cells

Arca Çakır D., Yirün A., Aydın S., Varan G., Tatar Yılmaz G., Erkekoğlu Ü. P., et al.
11 INTERNATIONAL CONGRESS OF THE TURKISH SOCIETY OF TOXICOLOGY, Antalya, Turkey, 2 - 05 November 2022, pp.129

COVID-19 Tedavisine Yönelik İn Siliko İlaç Geliştirme Çalışmaları

Tatar Yılmaz G.
Uluslararası Ege Sağlık Alanları Sempozyumu, İzmir, Turkey, 18 - 19 December 2021, pp.120-121 Sustainable Development

SARS-CoV-2 Spike, Main protease ve Nucleocapsid Proteinlerinin Molnupiravir ile Etkileşim Mekanizmasının Moleküler Kenetlenme Yöntemi ile İncelenmesi

Özyurt E., Tatar Yılmaz G., Turhan K.
13. TIP BİLİŞİMİ KONGRESİ, İstanbul, Turkey, 24 - 27 March 2021, pp.1-8 Sustainable Development

Evaluation Of Two Different Antibacterial Agents For Inhibition Of Streptococcus Mutans-Sortase A Enzyme Structure By Molecular Docking Method

SALMANLI M., TATAR G., TÜZÜNER T., YILMAZ N., BAYGIN Ö.
26.International Congress of Turkish Society of Pediatric Dentistry, 10 - 13 October 2019, pp.92-93

Zika Virüsüne karşı in-siliko ilaç tasarımı

Kok M. A., TATAR G., Taşkın Tok T.
3.Uluslararası Avrasya Multidisipliner Çalışmalar Kongresi, Gaziantep, Turkey, 4 - 07 April 2019, pp.304-311 Sustainable Development

Üç boyutlu DNA Aptamer Temelli Biyosensönler ile Endrokin bozucu kimyasallarin tespit edilmesi

BAYIL İ., TATAR G., TASKIN TOK T.
3.Uluslararası Avrasya Multidisipliner Çalışmalar Kongresi, Gaziantep, Turkey, 4 - 07 April 2019, pp.334-339

Recent Developments in eEF2 Kinase Inhibitors

AY M., CÖMERT ÖNDER F., KANDEMİR H., TAŞKIN TOK T., BELLUR ATİCİ E., TATAR G., et al.
International Conference on PharmaScience Research and Development (Pharma RD 2019), Paris, France, 4 - 06 March 2019, pp.25-26

Determination of potential selective inhibitors for ROCKI and ROCKII isoforms with molecular modeling techniques: Structure Based Docking,ADMET and Molecular Dynamics Simulation

TATAR G.
Proteinlerin Yapısı ve Etkileşimleri konulu Biyofizik Yaz Okulu, 29 - 30 August 2018

Molecular Docking Study of Novel 1,2,3,4,-Tetrahydroisoquinoline Derivates as Anticancer Agents against epidermal growth factor (EGFR) receptor

TATAR G., TASKIN TOK T., HASSAN Y., MOHAMMED A. D.
1. Uluslararası Kanser ve İyon Kanalları Kongresi, Şanlıurfa, Turkey, 21 - 23 September 2017, pp.132

Molecular Docking Study of Rho-Kinase (ROCK) inhibitors

BAYEL SECINTI B., TATAR G., TASKIN TOK T.
Innovation in Medicine Summit-3, Gaziantep, Turkey, 11 - 13 May 2017, pp.84

Evaluation of Docking Functions for ROCK2-Ligands Docking

YILDIRIM M., TATAR G., TASKIN TOK T.
4th International BAU Drug Design Congress, Gaziantep, Turkey, 13 - 15 October 2016, pp.230

Investigation of mutation on the molecular functions of ROCK2 (Rho-kinase2) protein with molecular modeling techniques

TATAR G.
EMBO Integrative modeling of biomolecular interactions practical course, Barselona, Spain, 4 - 09 July 2016, pp.35

Investigation of mutation on the molecular functions of ROCK2 protein with molecular modeling techniques

TATAR G., TAŞKIN TOK T.
Summer school on Molecular Modeling 4, Sardinia, Italy, 6 - 10 June 2016

Computer-assisted Drug Design and Development

TASKIN TOK T., TATAR G.
Innovation in Medicine Summit-2, Gaziantep, Turkey, 05 May 2016 - 07 May 2017, pp.79

Voltaj Kapılı Potasyum Kanal Proteinin Kv1 2 Homoloji Modellenmesi ve HsTx1 Toksini ile Etkileşim Mekanizmaların Docking Yöntemiyle Aydınlatılması

YILMAZ K., TATAR G., TAŞKIN TOK T.
27. Ulusal Kimya Kongresi, Turkey, 23 - 28 August 2015

Elucidation of Interaction Mechanism of Coronavirus protein with Molecular Docking

TATAR G., TASKIN TOK T.
Modeling of Biomolecular Systems Interactions, Dynamics and Allostery: Bridging Experiments and Computations, İstanbul, Turkey, 10 - 14 September 2014, pp.137 Sustainable Development

Homology modeling of Coronavirus (CoV) structural proteins and its interaction mechanism analysis

TATAR G., TAŞKIN TOK T.
2. İlaç Kimyası, Üretim, Teknoloji ve Standardizasyon Kongresi, Turkey, 21 - 23 March 2014 Sustainable Development

Books & Book Chapters

Bilgisayar destekli ilaç tasarımı

Tatar Yılmaz G.
in: Protein yapısı, mühendisliği, etkileşimleri, dinamiği ve ilaç tasarımındaki yeri, Saliha Ece Acuner, Editor, Nobel Tıp Kitapevi, Ankara, pp.291-307, 2021

BİLGİSAYAR DESTEKLİ İLAÇ TASARIMI

TATAR YILMAZ G.
in: PROTEİN: YAPISI, MÜHENDİSLİĞİ, ETKİLEŞİMLERİ, DİNAMİĞİ VE İLAÇ TASARIMINDAKİ YERİ, Saliha Ece ACUNER, Editor, Ankara Nobel Tıp Kitabevleri, Ankara, pp.291-307, 2021