Doç. Dr. UĞUR UZUNER

Yayın Ağı

Makaleler 31

1. Multidirectional in silico and in vitro Research for the Pharmaceutical Potential of Fibigia Clypeata (L.) Medik: Phytochemical, Antimicrobial, and Antimyeloma Properties

ÜNVER T., UZUNER U., Akcora-Yildiz D., Gurhan I., Arkan C., ÖZDEMİR Z.

ChemistryOpen , cilt.14, sa.12, 2025 (SCI-Expanded, Scopus)

2. **Phytochemical investigation, antimicrobial activities, and molecular docking studies on endemic Gelasia sericea (Aucher ex DC.) Zaika, Sukhor. & N.Kilian grown in Türkiye**

BOZDAL G., KORKMAZ B., Abanoz M. E., Sahin B., UZUNER U., BOZDEVECİ A., et al.

NATURAL PRODUCT RESEARCH , 2025 (SCI-Expanded, Scopus)

3. Selective anastasis induction by bee venom in normal cells: a promising strategy for breast cancer therapy with minimal impact on cell viability

Tetikoglu S., Akcan M., Uzuner U., Çelik Uzuner S.

JOURNAL OF ZHEJIANG UNIVERSITY: SCIENCE B , ss.1-11, 2025 (SCI-Expanded, Scopus)

4. Evaluation of the mechanical properties and cell cultural behavior of diamond lattice scaffolds with different porosities

KAHRAMANZADE H., ÇELİK UZUNER S., ÇAM S., UZUNER U.

Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine , cilt.239, sa.4, ss.388-397, 2025 (SCI-Expanded, Scopus)

5. Synthesis of novel benzofuran-4,7-quinones from 4,6-dimethoxybenzofurans specifically targeting breast and lung cancer cells

Ucar T. N. U., Izgi S., AYAZOĞLU DEMİR E., Uzuner S., Sengul I. F., UZUNER U., et al.

MONATSHEFTE FUR CHEMIE , cilt.156, sa.4, ss.467-480, 2025 (SCI-Expanded, Scopus)

6. **Bioimaging of thiazolidine-4-one-based new probes, fluorimetric detection of Cu²⁺ "on-off" sensor property, DFT calculation, molecular docking studies, and multiple real samples application**

Karakilic E., Basceken S., Eskiler G. G., UZUNER U., Baran A.

FOOD CHEMISTRY , cilt.463, 2025 (SCI-Expanded, Scopus)

7. Evaluation cytotoxic activity of Zn(II) phthalocyanine on cancer cells and molecular docking studies

UZUNER U., ÇELİK UZUNER S., KAYA İ. H., AKKOL Ç., YILMAZ M., SAKA E. T.

Turkish Journal of Analytical Chemistry (Online) , cilt.6, sa.2, ss.115-128, 2024 (TRDizin)

8. Elucidating the antimicrobial and anticarcinogenic potential of methanolic and water extracts of edible Tragopogon coelesyriacus Boiss.

ÜNVER T., UZUNER U., ÇELİK UZUNER S., Gurhan I., Sivri N. S., ÖZDEMİR Z.

Food Science and Nutrition , cilt.12, sa.10, ss.7252-7272, 2024 (SCI-Expanded, Scopus)

9. Production and characterization of novel thermostable CotA-laccase from Bacillus altitudinis SL7 and its application for lignin degradation

Khan S. I., Sahinkaya M., Colak D. N., Zada N. S., UZUNER U., BELDÜZ A. O., et al.

ENZYME AND MICROBIAL TECHNOLOGY , cilt.172, 2024 (SCI-Expanded, Scopus)

10. Functional and Extracellular Production and Antitumor Activity of Mouse Alpha Klotho in Model Microalga Chlamydomonas reinhardtii

Çakmak R., UZUNER U.

CHEMISTRY & BIODIVERSITY , cilt.21, sa.1, 2024 (SCI-Expanded, Scopus)

11. Exploring epigenetic drugs as potential inhibitors of SARS-CoV-2 main protease: a docking and MD simulation study

Uzuner U., Akkus E., Kocak A., Çelik Uzuner S.

JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS , cilt.42, sa.13, ss.6892-6903, 2024 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

12. **Strategic utilization of microalgae byproducts for sustainable biofertilization of Camellia sinensis (green tea)**

Çakmak R., UZUNER U.

JOURNAL OF PLANT NUTRITION , cilt.47, sa.6, ss.958-971, 2024 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

13. MW Assisted Synthesis of New 4,6-diaryl-3,4-Didhydropyrimidines-2(1H)-thione Derivatives: Tyrosinase Inhibition, Antioxidant, and Molecular Docking Studies

FANDAKLI S., YÜCEL T. B., ÖZTÜRK E., UZUNER U., BARUT B., ATEŞ F. M., et al.

CUMHURIYET SCIENCE JOURNAL , cilt.44, sa.4, ss.687-696, 2023 (TRDizin)

14. Newly Synthesized N-Glycosidic Halochalcones Reveal Inhibitory Activity on Pancreatic Triacylglycerol Lipase

Yikilmaz M., Fandakli S., ŞENER S. Ö., BADEM M., KANBOLAT Ş., YAYLI N., et al.

CHEMISTRY OF NATURAL COMPOUNDS , cilt.59, sa.4, ss.629-637, 2023 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

15. Article Artificial intelligence-based HDX (AI-HDX) prediction reveals fundamental characteristics to protein dynamics: Mechanisms on SARS-CoV-2 immune escape

Yu J., Uzuner U., Long B., Wang Z., Yuan J. S., Dai S. Y.

ISCIENCE , cilt.26, sa.4, 2023 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

16. **Dihydroisocoumarins and Phenylglycosides from Scorzonera longiana, Their Antimicrobial Activities and Molecular Docking Studies**

KORKMAZ B., RENDA G., BOZDAL G., ÇOŞKUNÇELEBİ K., Bozdeveci A., UZUNER U., et al.

CHEMISTRY & BIODIVERSITY , cilt.20, sa.4, 2023 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

17. The effect of friction stir process on the mechanical, tribological, and biocompatibility properties of AZ31B magnesium alloy as a biomaterial: A pilot study

Kahramanzade H., Celik-Uzuner S., Uzuner U., Sert Y., Küçükömeroğlu T.

PROCEEDINGS OF THE INSTITUTION OF MECHANICAL ENGINEERS PART H-JOURNAL OF ENGINEERING IN MEDICINE , cilt.236, ss.1720-1731, 2022 (SCI-Expanded, Scopus)

18. The Effect of Friction Stir Process on the Mechanical, Tribological and Biocompatibility Properties of AZ31B Magnesium Alloy as a Biomaterial, a Pilot Study

Kahramanzade H., Çelik Uzuner S., Uzuner U., Sert Y., Küçükömeroğlu T.

PROCEEDINGS OF THE INSTITUTION OF MECHANICAL ENGINEERS, PART H: JOURNAL OF ENGINEERING IN MEDICINE , cilt.236, sa.12, ss.1720-1731, 2022 (SCI-Expanded, Scopus)

19. Comparison of Cellular Autofluorescence Patterns of Two Model Microalgae by Flow Cytometry

UZUNER U.

Celal Bayar Üniversitesi Fen Bilimleri Dergisi , cilt.17, sa.2, ss.159-165, 2021 (TRDizin)

20. Homology modeling and heterologous expression of highly alkaline subtilisin-like serine protease fromBacillus haloduransC-125

Tekin A., Uzuner U., Sezen K.

BIOTECHNOLOGY LETTERS , cilt.43, sa.2, ss.479-494, 2021 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

21. The Detailed Comparison of Cell Death Detected by Annexin V-PI Counterstain Using Fluorescence Microscope, Flow Cytometry and Automated Cell Counter in Mammalian and Microalgae Cells

Koç E., Celik-Uzuner S., Uzuner U., Cakmak R.

JOURNAL OF FLUORESCENCE , cilt.28, sa.6, ss.1393-1404, 2018 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

22. Improved pulp bleaching potential of Bacillus subtilis WB800 through overexpression of three lignolytic enzymes from various bacteria

OZER A., UZUNER U., GÜLER H. İ., Sal F., BELDÜZ A. O., DENİZ İ., et al.

BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY , cilt.65, sa.4, ss.560-571, 2018 (SCI-Expanded, Scopus)

23. An Extensive Method for Maintenance of Sterility in Mammalian Cell Culture Laboratory Routine

ÇELİK UZUNER S., UZUNER U.

Challenges , cilt.8, sa.2, ss.1-6, 2017 (Hakemli Dergi)

24. Redesigning pH optimum of Geobacillus sp TF16 endoxylanase through in silico designed DNA swapping strategy

UZUNER U., ÇANAKÇI S., Bektas K., SAPMAZ M. T., BELDÜZ A. O.

BIOCHIMIE , cilt.137, ss.174-189, 2017 (SCI-Expanded, Scopus)

25. Effects of various estrogen ligands on the structural conformation of human estrogen receptor alpha

Chen X., UZUNER U., Li M., Shi W., Yuan J. S., Dai S. Y.

INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE , cilt.40, 2017 (SCI-Expanded, Scopus)

26. Phytoestrogens and Mycoestrogens Induce Signature Structure Dynamics Changes on Estrogen Receptor

Chen X., Uzuner U., Li M., Shi W., Yuan J. S., Dai S. Y.

INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH , cilt.13, sa.9, 2016 (SCI-Expanded, SSCI, Scopus)

27. Relationships among some endemic Hieracium L s str Asteraceae taxa based on internal transcribed spacer ITS

GÜLTEPE M., ÇOŞKUNÇELEBİ K., BELDÜZ A. O., UZUNER U.

Biological Diversity and Conservation , cilt.6, sa.2, ss.134-141, 2014 (TRDizin)

28. Comparative analysis of insect gut symbionts for composition-function relationships and biofuel application potential

Shi W., UZUNER U., Huang L., Jesudhasan P. R., Pillai S. D., Yuan J. S.

Biofuels , cilt.2, sa.5, ss.529-544, 2011 (SCI-Expanded, Scopus)

29. HDX-Analyzer: a novel package for statistical analysis of protein structure dynamics

Liu S., Liu L., UZUNER U., Zhou X., Gu M., Shi W., et al.

BMC BIOINFORMATICS , cilt.12, 2011 (SCI-Expanded, Scopus)

30. Enzyme structure dynamics of xylanase I from Trichoderma longibrachiatum

Uzuner U., Shi W., Liu L., Liu S., Dai S. Y., Yuan J. S.

BMC BIOINFORMATICS , cilt.11, 2010 (SCI-Expanded, Scopus)

31. Internal transcribed spacer (ITS) polymorphism in the wild Primula (Primulaceae) taxa of Turkey

Gultepe M., Uzuner U., ÇOŞKUNÇELEBİ K., BELDÜZ A. O., TERZİOĞLU S.

TURKISH JOURNAL OF BOTANY , cilt.34, sa.3, ss.147-157, 2010 (SCI-Expanded, Scopus, TRDizin)

Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 34

1. SARS-CoV-2 Omikron BA.4 ve BA.5 Varyantlarında S1 RBD Bölgesinin Moleküler Docking Analizi

YEŞİLYURT B., DEMİR Ö. B., UZUNER U.

26. ULUSAL BİYOLOJİ KONGRESİ, Muğla, Türkiye, 3 - 07 Eylül 2025, (Özet Bildiri)

2. The Utilization of Microalgal Wastes in Mass Production of Medicinal Plants

EL M., ÇAKMAK R., UZUNER U.

International Eurasian Conference on Biotechnology and Biochemistry (BioTechBioChem 2020), Ankara, Türkiye, 16 Aralık 2020, (Özet Bildiri)

3. Chlorella vulgaris is a Promising Biofertilizer for Camellia sinensis Organic Farming

CAKMAK R., EL M., UZUNER U.

International Eurasian Conference on Biotechnology and Biochemistry (BioTechBioChem 2020), Ankara, Türkiye, 16 Aralık 2020, (Özet Bildiri)

4. Algae Potentials for Crop Protection and Modern Agriculture

Uzuner U.

Eurasian Congress on Molecular Biotechnology, Trabzon, Türkiye, 19 - 21 Eylül 2019, ss.39-40, (Özet Bildiri) Sürdürülebilir Kalkınma

5. Extracellular Production of Bacillus halodurans C-125 Alkaline Protease in Bacillus subtilis XW800

SEZEN K., TEKİN A., UZUNER U.

Eurasian Congress on Molecular Biotechnology, 19 - 21 Eylül 2019, (Özet Bildiri)

6. In-Depth Structural Analysis of Thermostable Alkaline Serine Protease from Bacillus halodurans C-125: An in silico Approach.

Tekin A., UZUNER U., SEZEN K.

International Conference Of Genomics And Bioinformatics (ICGB), Aydın, Türkiye, 1 - 04 Kasım 2018, ss.1, (Tam Metin Bildiri)

7. Effects of various estrogen ligands on the structural conformation of human estrogen receptor ?

Chen X., UZUNER U., Li M., Shi W., Yuan J. S., Dai S. Y.

22nd World Congress on Advances in Oncology and 20th International Symposium on Molecular Medicine, Atina, Yunanistan, 5 - 07 Ekim 2017, ss.11-12, (Tam Metin Bildiri) Sürdürülebilir Kalkınma

8. Structure and Homology Modelling of Arabidopsis thaliana Non-expresser of Pathogenesis Related 1 Gene and Thioredoxin 5

UZUNER U.

2nd Japan – Turkey International Symposium on Pharmaceutical and Biomedical Sciences (JATUSPAB-2), Trabzon, Türkiye, 11 - 12 Eylül 2017, ss.22, (Tam Metin Bildiri)

9. Empowering enzyme characteristics through rational design

UZUNER U., ÇANAKÇI S., Bektas K. I., TUNCEL M., BELDÜZ A. O.

European Biotechnology Congress, Dubrovnik, Hırvatistan, 25 - 27 Mayıs 2017, cilt.256, (Özet Bildiri)

10. Determination of paper bleaching potentials of some ligninolytic enzymes produced in operon form

ÇANAKÇI S., Ozer A., UZUNER U., GÜLER H. İ., BELDÜZ A. O., DENİZ İ.

European Biotechnology Congress, Dubrovnik, Hırvatistan, 25 - 27 Mayıs 2017, cilt.256, (Özet Bildiri)

11. DETERMINATION OF WASTE PAPER PULP BLEACHING CAPACITY OF THREE LIGNINOLYTIC ENZYMES PRODUCED SIMULTANEOUSLY

BELDÜZ A. O., ÖZER A., UZUNER U., GÜLER H. İ., DENİZ İ., ÇANAKÇI S.

Internatioanl DNA Day and Genome Congress, Kırşehir, Türkiye, 24 - 28 Nisan 2017, ss.149, (Özet Bildiri)

12. Improving the Alkaline Tolerance of Geobacillus sp.TF16 Endoxylanase by In Silico Design Driven DNA Swapping

Uzuner U., Tuncel M., İnan K., Canakcı S., Beldüz A. O.

11th International Conference on Protein Stabilisation, İstanbul, Türkiye, 9 - 11 Mayıs 2016, ss.1, (Tam Metin Bildiri)

13. TF16 endoxylanase by In Silico Design Driven DNA Swapping

UZUNER U., İNAN BEKTAŞ K., tuncel m., ÇANAKÇI S., BELDÜZ A. O.

11th International Conference on Protein Stabilisation, 9 - 11 Mayıs 2016, (Özet Bildiri)

14. Construction and Characterization of A New Chimeric Xylanase Active At High Temperature and pH

TUNCEL M., UZUNER U., ÇOLAK D. N., BELDÜZ A. O., ÇANAKÇI S.

ICBMB 2015 International Conference on Biochemistry and Molecular Biology, Paris, Fransa, 17 - 24 Nisan 2015, ss.22, (Özet Bildiri)

15. Hidrojen Deuterium Değişimi Kütle Spektrometrisi Tabanlı Endo Beta (1,4) Ksilanaz 1 in Enzim Karakteristiklerinin Geliştirilmesi

UZUNER U., Sun S., Shi W., Dai S. Y., Yuan J. S.

22. Ulusal Biyoloji Kongresi, Eskişehir, Türkiye, 23 - 27 Haziran 2014, ss.178, (Tam Metin Bildiri)

16. Yüksek Enerji İçerikli Hidrokarbon Üretimine Yönelik Olarak Oryza sativa spp. Böcek Savunma Geninin Chlamydomonas reinhardtii Hücrelerinde Overekspresyonu

UZUNER U., Syrenne R., Kyoung Kim, ., Yuan J. S.

22. Ulusal Biyoloji Kongresi, Eskişehir, Türkiye, 23 - 27 Haziran 2014, ss.277, (Tam Metin Bildiri)

17. Creating chimeras of different xylanases isolated from two Geobacillus species with DNA shuffling

TUNCEL M., UZUNER U., BELDÜZ A. O., ÇANAKÇI S.

3rd International Molecular Biology and Biotechnology Congress 2014, Sarajevo, Bosna-Hersek, 2 - 06 Haziran 2014, ss.161, (Tam Metin Bildiri)

18. Improving the Efficiency of Homologous Gene Replacement by Disrupting the NHEJ Pathway for Gene KusA in the Oleaginous Fungus Mortierella alpina

Krueger K., Dai Z., UZUNER U.

Annual Meeting of the California-Nevada Section of the APS, California, Amerika Birleşik Devletleri, 2 - 03 Kasım 2012, cilt.57, sa.13, ss.1, (Tam Metin Bildiri) Sürdürülebilir Kalkınma

19. Agrobacterium-Based Engineering of Chlamydomonas reinhardtii (CC-124) For Autotrophic Production of Terpenoid Hydrocarbons

UZUNER U., Syrenne R., Xie S., Dai S. Y., Dai S. Y., Yuan J. S.

2nd International Conference on Algal Biomass, Biofuels & Bioproducts, San Diego, California, Amerika Birleşik Devletleri, 10 - 13 Haziran 2012, ss.7, (Tam Metin Bildiri)

20. Hydrogen Deuterium Exchange Mass Spectrometry-Based Enzyme Dynamics Analysis Reveals New Structure Determinants And Mechanisms

UZUNER U., Shi W., Guo H., Dai S. Y., Yuan J. S.

Symposium for Biotechnology Fuels and Chemicals (34th SBFC), New Orleans, Louisiana, Amerika Birleşik Devletleri, 29 Nisan - 04 Mayıs 2012, ss.10-4, (Tam Metin Bildiri)

21. Metabolic Engineering of Green Algae for Autotrophic Production of Terpenoid Hydrocarbons

UZUNER U., Syrenne R., Xie S., Dai S. Y., Yuan J. S.

Symposium for Biotechnology Fuels and Chemicals (34th SBFC), New Orleans, Louisiana, Amerika Birleşik Devletleri, 29 Nisan - 04 Mayıs 2012, ss.12-3, (Tam Metin Bildiri)

22. Beyond Structure Characterization: Structure Dynamics (Hydrogen Deuterium Exchange) Guided Biocatalyst Improvement

UZUNER U., Shi W., Johnson Q., Guo H., Dai S. Y., Yuan J. S.

24th Sanibel Conference on Mass Spectrometry January, Pete Beach, Florida, Amerika Birleşik Devletleri, 19 Ocak 2012, ss.14-15, (Tam Metin Bildiri)

23. Dramatically Different Molecular Dynamics of Two Proteins with Similar Folding as Probed by Hydrogen Deuterium Exchange Mass Spectrometry and Molecular Dynamics Simulation

UZUNER U., Shi W., Johnson Q., Guo H., Dai S. Y., Yuan J. S.

24th Sanibel Conference on Mass Spectrometry January, Pete Beach, Florida, Amerika Birleşik Devletleri, 19 Ocak 2012, ss.18, (Tam Metin Bildiri)

24. A Novel Package for Statistical Analysis of Protein Structure Dynamics

Liu S., Liu L., UZUNER U., Zhou X., Gu M., Shi W., et al.

The Ninth Asia Pacific Bioinformatics Conference (APBC 2011), Incheon, South Korea, Güney Kore, 11 - 14 Ocak 2011, ss.8, (Tam Metin Bildiri)

25. Structure Dynamics Analysis of Xylanases

UZUNER U., Shi W., Liu L., Dai S. Y., Yuan J. S.

MidSouth Computational Biology and Bioinformatics Society (7th Annual MCBIOS Conference), Jonesboro, Arkansas, Amerika Birleşik Devletleri, 19 - 20 Şubat 2010, ss.12, (Tam Metin Bildiri)

26. Novel Software Package for HDX-Mass Spectrometry Analysis

Liu L., Zhou X., UZUNER U., Dai S. Y., Yuan J. S.

7th Annual MidSouth Computational Biology and Bioin-formatics Society (MCBIOS) Conference, Jonesboro, Arkansas, Amerika Birleşik Devletleri, 19 - 20 Şubat 2010, ss.14, (Tam Metin Bildiri)